Publications

40 Results Sorted by: Relevance

2024

03

Publications

The therapeutic landscape for COVID-19 and post-COVID-19 medications from genetic profiling of the Vietnamese population and a predictive model of drug-drug interaction for comorbid COVID-19 patients

Heliyon
Thien Khac Nguyen, Giang Minh Vu , Vinh Chi Duong, Thang Luong Pham,Nguyen Thanh Nguyen, Trang Thi Ha Tran, Mai Hoang Tran Duong Thuy Nguyen, Nam S. Vo, Huong Thanh Phung,, Tham Hong Hoang

AMRViz enables seamless genomics analysis and visualization of antimicrobial resistance

BMC bioinformatics
Duc Quang Le, Son Hoang Nguyen, Tam Thi Nguyen, Canh Hao Nguyen, Tho Huu Ho, Nam S Vo, Trang Nguyen, Hoang Anh Nguyen, Minh Duc Cao

Polygenic Risk Score of Common Genetic Variants for NSAIDS Hypersensitivity Prediction in Vietnamese

Journal of Allergy and Clinical Immunology
Dinh Nguyen, Trang Tran Thi Ha, Mai Tran Hoang, Nam Nguyen Le, Nam Nguyen Ngoc, Tien Pham Minh, Quang Vu Thanh, Anh Nguyen Quynh, Mai Vu Thi, Yen Pham Thi Hai, Thang Nguyen Van, Lan Phan Quynh, Nguyet Nguyen Thi Minh, Oanh Hoang Thi, Thuy Can Thi Thu, Anh Duong Thuy, Nguyet Nguyen Nhu, Hang Vu Thi, Sheryl Nunen Van, Timothy Craig John, Nam Vo Sy, Hieu Chu Chi

2023

07

Publications

Pembrolizumab-induced Stevens-Johnson syndrome/ Toxic epidermal necrolysis in a Vietnamese patient with non-small cell lung cancer: case report and mini review

Case Reports in Dermatology
Yen T.H. Pham, Mai T. Vu, Anh Q. Nguyen, Phat N. Trinh, Mai H. Tran, Hieu C. Chu, Nguyet T.M. Nguyen, Chi H.V. Vu, and Dinh V. Nguyen.

Nutritional status, refeeding syndrome and some associated factors of patients at COVID-19 hospital in Vietnam

Nutrients
Linh Thuy Nguyen, Thanh Van Ta, An Tuong Bui, Sy Nam Vo, Ngoc-Lan Thi Nguyen

A study of genetic variants associated with skin traits in the Vietnamese population

BMC Genomics
Tham Hong Hoang, Duc Minh Vu, Giang Minh Vu, Thien Khac Nguyen, Nguyet Minh Do, Vinh Chi Duong, Thang Luong Pham, Mai Hoang Tran, Ly Thi Khanh Nguyen, Han Thi Tuong Han, Thu-Thuy Can, Thai Hong Pham, Tho Duc Pham, Thanh Hong Nguyen, Huy Phuoc Do, Nam S Vo, Xuan-Hung Nguyen

A rapid and reference-free imputation method for low-cost genomics applications

Scientific Reports
Vinh Chi Duong, Giang Minh Vu, Thien Khac Nguyen, Hung Tran The Nguyen, Thang Luong Pham, Nam S. Vo, Tham Hong Hoang

A promising DNA methylation analysis pipeline for epigenetic studies and clinical implementation in inflammatory bowel disease

Digestive Medicine Research
Hang Viet Dao, Vinh Chi Duong, Long Van Dao, Long Bao Hoang, Thien Khac Nguyen, Thang Luong Pham, Giang Minh Vu, Tham Hong Hoang

Pasa: leveraging population pangenome graph to scaffold prokaryote genome assemblies

Nucleic Acid Research
Van Hoan Do, Son Hoang Nguyen, Duc Quang Le, Tam Thi Nguyen, Canh Hao Nguyen, Tho Huu Ho, Nam S Vo, Trang Nguyen, Hoang Anh Nguyen, Minh Duc Cao

Overlapping Stevens-Johnson Syndrome and DRESS Syndrome Caused by Phenobarbital: A Case Report and Mini Review

Global Pediatric Health
Khiem Van Nguyen, Quang Van Vu, Mai Hoang Tran, Huy Quoc Nguyen, Chi Quynh Le, Bang Cam Thi Dang, Hieu Chi Chu, and Dinh Van Nguyen

2022

09

Publications

LmTag: functional-enrichment and imputation-aware tag SNP selection for population-specific genotyping arrays

Briefings in Bioinformatics
Dat Thanh Nguyen, Quan Hoang Nguyen, Nguyen Thuy Duong, Nam S Vo

Assessing polygenic risk score models for applications in populations with under-represented genomics data: an example of Vietnam

Briefings in Bioinformatics
Duy Pham, Buu Truong, Khai Tran, Guiyan Ni, Dat Nguyen, Nam S. Vo, Quan Nguyen

A comprehensive evaluation of polygenic score and genotype imputation performances of human SNP arrays in diverse populations

Scientific Reports
Dat Thanh Nguyen, Trang T.H Tran, Mai Hoang Tran, Khai Tran, Duy Pham, Nguyen Thuy Duong, Quan Nguyen, Nam S. Vo

Polygenic risk scores adaptation for Height in Vietnamese population

KSE 2022
Trang T. H Tran, Tien M Pham, Nam N Nguyen, Mai H Tran, Giang M Vu, Quang T Vu, Duong T Nguyen, Nam S Vo

Autosomal recessive hyper-IgE syndrome due to DOCK8 deficiency: Effectiveness of omalizumab

Journal of Cutaneous Immunology and Allergy
Kim Han Nguyen, Quynh Anh Nguyen, Mai Hoang Tran, Thu Thuy Can, Mai Thi Vu, Nam Sy Vo, Hieu Chu Chi, Sheryl van Nunen, Dinh Van Nguyen

BRCA1/2 Mutations in Vietnamese Patients with Hereditary Breast and Ovarian Cancer Syndrome

Genes
T.-N.N. Le, V.-K. Tran, T.-T. Nguyen, N.S. Vo, T.H. Hoang, H.-L. Vo, T.-H.T. Nguyen, P.-D. Nguyen, V.-T. Nguyen, T.-V. Ta, H.-T. Tran

Graph convolutional networks for drug response prediction

IEEE/ACM Transactions on Computational Biology and Bioinformatics
Tuan Nguyen, Giang T.T. Nguyen, Thin Nguyen and Duc-Hau Le

Investigation of Target Sequencing of SARS-CoV-2 and Immunogenic GWAS Profiling in Host Cells of COVID-19 in Vietnam

BMC Infectious Diseases
Tham H. Hoang,Giang M. Vu, Mai H. Tran, Trang T. H. Tran,Quang D. Le, Khanh V. Tran,Tue T. Nguyen,Lan T. N. Nguyen,Thinh H. Tran,Van T. Ta and Nam S. Vo

Analysis of Periodontal Conditions in the Provinces of Vietnam: Results From the National Dental Survey

ASIA PAC J PUBLIC HEALTH
Nguyen Thi Hong Minh, Tran Cao Binh, Trinh Dinh Hai, Nguyen Thuy Duong, Quang-Thanh Bui

2021

10

Publications
10 July 2021

Analysis of Periodontal Conditions in the Provinces of Vietnam: Results From the National Dental Survey

Asia Pac J Public Health
Nguyen Thi Hong Minh, Tran Cao Binh, Trinh Dinh Hai, Nguyen Thuy Duong, Quang-Thanh Bui .
10 July 2021

A comprehensive and bias-free evaluation of genomic variant clinical interpretation tools

The 13th International Conference on KNOWLEDGE AND SYSTEMS ENGINEERING
Nguyen Minh Trang, Mai Nguyen Anh Vu, Tran Hoang Anh, Do Minh Nguyet, Nguyen Thanh Nguyen.
10 July 2021

A comprehensive imputation-based comparison of tag SNP selection strategies

The 13th International Conference on KNOWLEDGE AND SYSTEMS ENGINEERING
Dat Nguyen, Hieu Dinh, Giang Vu, Duong Nguyen, Nam S. Vo.
17 July 2021

miR-181a promotes multiple pro-tumorigenic functions through targeting TGFβR3

Journal of Investigative Dermatology
Vida Chitsazzadeh, Tran N Nguyen, Alvaro de Mingo Pulido, Bruna B Bittencourt, Lili Du, Charles H Adelmann, Ivannie Ortiz Rivera, Kimberly A Nguyen, Leah D Guerra, Andrew Davis, Marco Napoli, Wencai Ma, R Eric Davis, Kimal Rajapakshe, Cristian Coarfa, Elsa R Flores, Kenneth Y Tsai
17 July 2021

Docosanoid signaling modulates corneal nerve regeneration: effect on tear secretion, wound healing, and neuropathic pain

Journal of Lipid Research
Thang L Pham, Haydee E P Bazan
24 July 2021

Elucidating the structure and functions of Resolvin D6 isomers on nerve regeneration with a distinctive trigeminal transcriptome

The FASEB Journal
Thang L Pham, Azucena H Kakazu, Jiucheng He, Robert Nshimiyimana, Nicos A Petasis, Bokkyoo Jun, Nicolas G Bazan, Haydee E P Bazan
28 July 2021

ELV-N32 and RvD6 isomer decrease pro-inflammatory cytokines, senescence programming, ACE2 and SARS-CoV-2-spike protein RBD binding in injured cornea

Scientific Reports (Nature)
Thang L Pham, Jiucheng He, Azucena H Kakazu, Jorgelina Calandria, Khanh V Do, Robert Nshimiyimana, Ting F Lam, Nicos A Petasis, Haydee E P Bazan, Nicolas G Bazan1
13 January 2021

Review on Databases and Bioinformatics Approaches on Pharmacogenomics of Adverse Drug Reactions

Pharmacogenomics and Personalized Medicine (Q1) - AD
Hang Tong, Nga Phan, Thanh Nguyen, Dinh Nguyen, Nam Sy Vo, Ly Le
14 February 2021

Prevalence of pharmacogenomic variants in 100 pharmacogenes among Southeast Asian populations under the collaboration of the Southeast Asian Pharmacogenomics Research Network (SEAPharm)

Human Genome Variation (Nature) - PGx
Wasun Chantratita, Chakkaphan Runcharoen, Koya Fukunaga, Insee Sensorn, Nareenart Iemwimangsa, Sommon Klumsathian, Hang Tong, Nam Vo, Ly Le, Tin Hlaing, Myo Thant, Shamsul Mohd Zain, Zahurin Mohamed, Yuh-Fen Pung, Francis Capule, Jose Jr. Nevado, Catherine Lynn Silao, Zeina al-mahayri, Bassam Ali, Rika Yuliwulandari, Kinasih Prayuni, Hilyatuz Zahroh, Dzul Azri Mohamed Noor, Phonepadith Xangsayarath, Dalouny Xayavong, Sengchanh Kounnavong, Somphou Sayasone, Zoe Kordou, Ioannis Liopetas, Athina Tsikrika, Evangelia Eirini Tsermpini, Maria Koromina, Christina Mitropoulou, George Patrinos, Aumpika Kesornsit, Angkana Charoenyingwattana, Sukanya Wattanapokayakit, Surakameth Mahasirimongkol, and Taisei Mushiroda
3 July 2021

Clinical evaluation of RB1 genetic testing reveals novel mutations in Vietnamese patients with retinoblastoma

Spandidos Publications
Chinh Quoc Hoang, Hong-Quan Duong, Nguyen Thanh Nguyen, Sy Anh Hao Nguyen, Cuong Nguyen, Bo Duy Nguyen, Lan Tuyet Phung, Dung Thuy Nguyen, Chau Thi Minh Pham, Trang Le Doan, Mai Hoang Tran.

2020

06

Publications
16 December 2020

Analysis of Short-read Aligners using Genome Sequence Complexity

KSE Conference (IEEE) - Genome Analysis
Quang Tran, Nam Sy Vo, Eric Hicks, Tin Nguyen and Vinhthuy Phan
16 November 2020

Active Learning: The Almost Silver Bullet

KSE Conference (IEEE) - Others
Eric Hicks, Quang Tran, Kriangsiri Malasri, Nam Sy Vo and Vinhthuy Phan
2 January 2020

Complete Chloroplast Genome of Paphiopedilum delenatii and Phylogenetic Relationships among Orchidaceae

Plants (Q1) - Phylogenetics
Vu HT, Tran N, Nguyen TD, Vu QL, Bui MH, Le MT, Ly Le
31 December 2020

iBRAB: In silico based-designed broad-spectrum Fab against H1N1 influenza A virus

Plos ONE (Q1) - Others
Do, P. C., Nguyen, T. H., Vo, U. H., Ly Le
15 June 2020

Unveiling Prognostics Biomarkers of Tyrosine Metabolism Reprogramming in Liver Cancer by Cross-platform Gene Expression Analyses

Plos ONE (Q1) - Gene Expression Analysis
Nguyen TN, Nguyen HQ, Le D-H, Tran N. Nguyen
14 October 2020

Integrative transcriptomic analysis for linking acute stress responses to squamous cell carcinoma development

Scientific Reports (Q1) - Transcriptomic Analysis
Tran N. Nguyen, Kimal Rajapakshe, Courtney Nicholas, Leticia Tordesillas, Erik A. Ehli, Christel M. Davis, Cristian Coarfa, Elsa R. Flores, Sally E. Dickinson, Clara Curiel-Lewandrowski & Kenneth Y. Tsai

2019

05

Publications
4 October 2019

SoutheastAsian Pharmacogenomics Research Network (SEAPharm): Current Status and Perspectives

Public Health Genomics (Q2) - PGx
Supatat Chumnumwat, Zen Huat Lu, Chonlaphat Sukasem, Michael Winther, Francis Capule, Asma A'tiyah Abdul Hamid , Bibek Bhandari, Usa Chaikledkaew , Noppadol Chanhom, Soranun Chantarangsu, Angkana Charoenyingwattana , Tong Thi Hang, Tin Maung Hlaing, Kyaw Soe Htun,Jiraphun Jittikoon, Ly Le, Surakameth Mahasirimongkol, Dzul, Azri Mohamed Noor, Jesus Shrestha, Lakkana Suwannoi, Pramote Tragulpiankit, Saowalak Turongkaravee , Sukanya Wattanapokayakit, Phonepadith Xangsayarath, Rika Yuliwulandari, Shamsul Mohd Zain,Wasun Chantratita
18 April 2019

A Novel Method for Multispectral Image Classification by Using Social Spider Optimization Algorithm Integrated to Fuzzy C-Mean Clustering

Canadian Journal of Remote Sensing (Q1) - Others
Quang-Thanh Bui, Quoc-Huy Nguyen, Van Manh Pham, Vu Dong Pham, Mai Hoang Tran, Trang T.H. Tran, Huu Duy Nguyen, Xuan Linh Nguyen & Hai Minh Pham
31 December 2019

Liquid biopsy to characterize cell-free DNA in detecting and monitoring of cancers

Journal of Research and Development on Information and Communication Technology - Cancer
Tran N. Nguyen
5 December 2019

RIA: a Novel Regression-based Imputation Approach for Single-Cell RNA Sequencing

IEEE KSE Conference (IEEE) - Single-Cell
Bang Tran, Duc Tran, Hung Nguyen, Nam Vo, Tin Nguyen
24 December 2019

Plant Metabolite Databases: From Herbal Medicines to Modern Drug Discovery

Journal of Chemical Information and Modeling (Q1) - Drug Discovery
Nguyen-Vo, Thanh-Hoang; Nguyen, Loc; Do, Nguyet, Nguyen, Thien-Ngan; Trinh, Khang, Cao, Hung, Le Ly